Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924509.1_cds_XP_016472851.1_65041
CDS Infomation

[gene=LOC107794828] [db_xref=GeneID:107794828] [protein=pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like] [protein_id=XP_016472851.1] [location=17181..18989] [gbkey=CDS]
Sequence

ATGATTTTAGCAACTACACCAAGGCCAACAACTTATGCCATCAACACCAGCACCAACACT
AGTGAACATCGACGCCATATCCTCCAAATCTTGACACAATGCACTTCCATTTCTCAGCTC
AAACAAGTACACGCCTATACTCTTCGTACAACCACACTTGACAACACAGACACCCTTTTC
CTCTACAGCAGAATTCTCCATTTTGCCTCCTTACATGACCTTAATTATTCTTTTCAACTC
TTCAGTAATTTAGAAAACACCAATTCCTTCATCTGGAATACTCTTATTAGAGCTTGTGCT
CATAGCAGTAGTCGTAAAGATGAAGCCTTTTTGCTTTTTTATAAAATGGCTACAAATGTT
GAGCCTGATAAGCATACTTTCCCATTTGTGCTCAAGGCTTGTGCTTATCTTTTTGCACTT
TCTGAAGGGAAACAAGCACATGGGTTTGCTTTGAAACTTGGGTTTGATTCAGATGTGTAT
ATAAACAATAGTTTGATTCATTTTTATTCGTCTTGTGGGAGTTTGAAGGATGCTAGGAGA
GTGTTTGATAAAATGCCTGAGAGAAGTTTGGTGTCTTGGAATGTTATGATTGATGCTCTT
GTTCAATCGGGTGAGTTTGAAAGTGCTTTGAGAATGTTTTCTGAGATGCAAAAGATATTT
GAGCCTGATGGATATACGATGCAAAGTGTTCTTGATGCTTGTGCTGGCTTTGGGGCGTTA
TCTTTGGGAATGTGGGTTCATGCTCATGTTTTAAGGAAGTATGAGAGCTTCTTAGATTTT
GATTTGCTGGTTAACAATTGTTTATTGAACATGTATTGCAAATGTGGTTCGTTGAATATG
GCTGTTCAGGTTTTCGAGAGGATGAGCAAACGTGATTTGAATTCTTGGAATGCTATGATA
TTAGGATTTGCAATGCATGGGGAGGTTGAGGCAGTGTTTCGTTGTTTTAACCAAATGGTT
AACGAAAGAGTAATGCCTGATTCAATCACATTTGTTGGTATTTTGAGTGCTTGTAATCAT
AGAGGTTTTGTTGGCGAGGGCAATAATTATTTTGATAAAATGGTTTCTGAGTATAAGATT
AAGCCTGTTTTAGAGCACTACGGTTGCCTGGTTGACCTTCTGGCTCGTTCGGGGCATATT
GATGAAGCTGTTGATGTCGTATCAAACATGCCAATGAAACCTGATGCAGCAATATGGAGG
AGTCTTCTTGATGGTTGCTGCAAGAAAAACGCTGACATAGGACTTAGTGAAGAAGTGGCA
AGGAAAGTAATTGAGTCCGAAGGCAGTGACACTAGTGGTGTTTATGTTCTTTTGTCAAGA
GTATATGCAACTGCTAACCGATGGGACGAGGCTGGACTGATTAGGAAATTGATGACCGAT
AAGGGTATTAAAAAAGATCCAGGCTGTAGTTCAATTGAAATTAATGGCGTTTTCCATGAA
TTTTTCGCTGGAGATACTTCTCATTTGCATACTAGAGAAATTTACAAGTTTTTGGATGTT
ATAGAAGAAAGACTCAAATTAGCAGGGTATGTTCCTGACTTGTCACAAGCATCAATGGTT
GATGAACTTGATAATGGGAAGAGACGGTCGCTTAAACTGCACAGTGAGAGACTTGCCATT
GCTTATGGACTTCTGAAACTGAAACCGGGAACTCCTATACGCATTTTCAAGAATTTGCGA
ATCTGCAGTGACTGCCACAATGTAACCAAATTAATTTCGAAAGTTTTTGACGTTGAAATT
ATTGTTAGAGATCGTGTTCGGTTCCATCACTTTAGGAATGGTTCCTGTACCTGCAAAGAC
TACTGGTGA

Peptide Sequence

PEP ID

XP_016472851.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MILATTPRPTTYAINTSTNTSEHRRHILQILTQCTSISQLKQVHAYTLRTTTLDNTDTLF
LYSRILHFASLHDLNYSFQLFSNLENTNSFIWNTLIRACAHSSSRKDEAFLLFYKMATNV
EPDKHTFPFVLKACAYLFALSEGKQAHGFALKLGFDSDVYINNSLIHFYSSCGSLKDARR
VFDKMPERSLVSWNVMIDALVQSGEFESALRMFSEMQKIFEPDGYTMQSVLDACAGFGAL
SLGMWVHAHVLRKYESFLDFDLLVNNCLLNMYCKCGSLNMAVQVFERMSKRDLNSWNAMI
LGFAMHGEVEAVFRCFNQMVNERVMPDSITFVGILSACNHRGFVGEGNNYFDKMVSEYKI
KPVLEHYGCLVDLLARSGHIDEAVDVVSNMPMKPDAAIWRSLLDGCCKKNADIGLSEEVA
RKVIESEGSDTSGVYVLLSRVYATANRWDEAGLIRKLMTDKGIKKDPGCSSIEINGVFHE
FFAGDTSHLHTREIYKFLDVIEERLKLAGYVPDLSQASMVDELDNGKRRSLKLHSERLAI
AYGLLKLKPGTPIRIFKNLRICSDCHNVTKLISKVFDVEIIVRDRVRFHHFRNGSCTCKD
YW

Transcript Sequence

Gene sequence data has not been registered.